Add CHEBI terms to 'response to ...' EFO terms #2490
Description
We have many terms in EFO with EFO ID that are 'response to ...', being "..." a term that could be found in CHEBI. We would like to find all these EFO terms and, if they miss this axiom, add:
has_primary_input some CHEBI term
has_primary_input is the RO term RO:0004009
Example for 'has primary input' some 'tyrosine kinase inhibitor' add:
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0004009"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_38637"/>
</owl:Restriction>
</rdfs:subClassOf>
full term:
<!-- http://www.ebi.ac.uk/efo/EFO_0009170 -->
<owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0009170">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/GO_0009410"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0004009"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_38637"/>
</owl:Restriction>
</rdfs:subClassOf>
<obo:IAO_0000115>Response to drug that inhibits tyrosine kinases.</obo:IAO_0000115>
<obo:IAO_0000117>Hannah McLaren</obo:IAO_0000117>
<oboInOwl:hasExactSynonym>response to TKI</oboInOwl:hasExactSynonym>
<rdfs:label>response to tyrosine kinase inhibitor</rdfs:label>
</owl:Class>
Some CHEBI terms are not imported, and you can use the OLS MCP to find them.