Skip to content

Commit d55844e

Browse files
authored
Merge pull request #158 from cicirello/create-pull-request/docs
Automated API website updates.
2 parents cf5087d + 354b6c5 commit d55844e

File tree

134 files changed

+3265
-12767
lines changed

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

134 files changed

+3265
-12767
lines changed

docs/api/allclasses-index.html

Lines changed: 72 additions & 117 deletions
Large diffs are not rendered by default.

docs/api/allclasses.html

Lines changed: 37 additions & 44 deletions
Original file line numberDiff line numberDiff line change
@@ -25,50 +25,43 @@
2525
<h1 class="bar">All&nbsp;Classes</h1>
2626
<main role="main" class="indexContainer">
2727
<ul>
28-
<li><a href="org/cicirello/permutations/distance/AcyclicEdgeDistance.html" title="class in org.cicirello.permutations.distance">AcyclicEdgeDistance</a></li>
29-
<li><a href="org/cicirello/permutations/distance/BlockInterchangeDistance.html" title="class in org.cicirello.permutations.distance">BlockInterchangeDistance</a></li>
30-
<li><a href="org/cicirello/util/Copyable.html" title="interface in org.cicirello.util"><span class="interfaceName">Copyable</span></a></li>
31-
<li><a href="org/cicirello/permutations/distance/CyclicEdgeDistance.html" title="class in org.cicirello.permutations.distance">CyclicEdgeDistance</a></li>
32-
<li><a href="org/cicirello/permutations/distance/CyclicIndependentDistance.html" title="class in org.cicirello.permutations.distance">CyclicIndependentDistance</a></li>
33-
<li><a href="org/cicirello/permutations/distance/CyclicIndependentDistanceDouble.html" title="class in org.cicirello.permutations.distance">CyclicIndependentDistanceDouble</a></li>
34-
<li><a href="org/cicirello/permutations/distance/CyclicReversalIndependentDistance.html" title="class in org.cicirello.permutations.distance">CyclicReversalIndependentDistance</a></li>
35-
<li><a href="org/cicirello/permutations/distance/CyclicReversalIndependentDistanceDouble.html" title="class in org.cicirello.permutations.distance">CyclicReversalIndependentDistanceDouble</a></li>
36-
<li><a href="org/cicirello/permutations/distance/CyclicRTypeDistance.html" title="class in org.cicirello.permutations.distance">CyclicRTypeDistance</a></li>
37-
<li><a href="org/cicirello/permutations/distance/DeviationDistance.html" title="class in org.cicirello.permutations.distance">DeviationDistance</a></li>
38-
<li><a href="org/cicirello/permutations/distance/DeviationDistanceNormalized.html" title="class in org.cicirello.permutations.distance">DeviationDistanceNormalized</a></li>
39-
<li><a href="org/cicirello/permutations/distance/DeviationDistanceNormalized2005.html" title="class in org.cicirello.permutations.distance">DeviationDistanceNormalized2005</a></li>
40-
<li><a href="org/cicirello/permutations/distance/EditDistance.html" title="class in org.cicirello.permutations.distance">EditDistance</a></li>
41-
<li><a href="org/cicirello/sequences/distance/EditDistance.html" title="class in org.cicirello.sequences.distance">EditDistance</a></li>
42-
<li><a href="org/cicirello/permutations/distance/ExactMatchDistance.html" title="class in org.cicirello.permutations.distance">ExactMatchDistance</a></li>
43-
<li><a href="org/cicirello/sequences/distance/ExactMatchDistance.html" title="class in org.cicirello.sequences.distance">ExactMatchDistance</a></li>
44-
<li><a href="org/cicirello/permutations/distance/InterchangeDistance.html" title="class in org.cicirello.permutations.distance">InterchangeDistance</a></li>
45-
<li><a href="org/cicirello/math/la/JacobiDiagonalization.html" title="class in org.cicirello.math.la">JacobiDiagonalization</a></li>
46-
<li><a href="org/cicirello/permutations/distance/KendallTauDistance.html" title="class in org.cicirello.permutations.distance">KendallTauDistance</a></li>
47-
<li><a href="org/cicirello/sequences/distance/KendallTauSequenceDistance.html" title="class in org.cicirello.sequences.distance">KendallTauSequenceDistance</a></li>
48-
<li><a href="org/cicirello/permutations/distance/LeeDistance.html" title="class in org.cicirello.permutations.distance">LeeDistance</a></li>
49-
<li><a href="org/cicirello/sequences/distance/LongestCommonSubsequenceDistance.html" title="class in org.cicirello.sequences.distance">LongestCommonSubsequenceDistance</a></li>
50-
<li><a href="org/cicirello/math/MathFunctions.html" title="class in org.cicirello.math">MathFunctions</a></li>
51-
<li><a href="org/cicirello/math/la/MatrixOps.html" title="class in org.cicirello.math.la">MatrixOps</a></li>
52-
<li><a href="org/cicirello/permutations/distance/NormalizedPermutationDistanceMeasurer.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">NormalizedPermutationDistanceMeasurer</span></a></li>
53-
<li><a href="org/cicirello/permutations/distance/NormalizedPermutationDistanceMeasurerDouble.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">NormalizedPermutationDistanceMeasurerDouble</span></a></li>
54-
<li><a href="org/cicirello/permutations/Permutation.html" title="class in org.cicirello.permutations">Permutation</a></li>
55-
<li><a href="org/cicirello/permutations/Permutation.Mechanic.html" title="class in org.cicirello.permutations">Permutation.Mechanic</a></li>
56-
<li><a href="org/cicirello/permutations/distance/PermutationDistanceMeasurer.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">PermutationDistanceMeasurer</span></a></li>
57-
<li><a href="org/cicirello/permutations/distance/PermutationDistanceMeasurerDouble.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">PermutationDistanceMeasurerDouble</span></a></li>
58-
<li><a href="org/cicirello/permutations/PermutationIterator.html" title="class in org.cicirello.permutations">PermutationIterator</a></li>
59-
<li><a href="org/cicirello/math/rand/RandomIndexer.html" title="class in org.cicirello.math.rand">RandomIndexer</a></li>
60-
<li><a href="org/cicirello/math/rand/RandomVariates.html" title="class in org.cicirello.math.rand">RandomVariates</a></li>
61-
<li><a href="org/cicirello/permutations/distance/ReinsertionDistance.html" title="class in org.cicirello.permutations.distance">ReinsertionDistance</a></li>
62-
<li><a href="org/cicirello/permutations/distance/ReversalDistance.html" title="class in org.cicirello.permutations.distance">ReversalDistance</a></li>
63-
<li><a href="org/cicirello/permutations/distance/ReversalIndependentDistance.html" title="class in org.cicirello.permutations.distance">ReversalIndependentDistance</a></li>
64-
<li><a href="org/cicirello/permutations/distance/ReversalIndependentDistanceDouble.html" title="class in org.cicirello.permutations.distance">ReversalIndependentDistanceDouble</a></li>
65-
<li><a href="org/cicirello/permutations/distance/RTypeDistance.html" title="class in org.cicirello.permutations.distance">RTypeDistance</a></li>
66-
<li><a href="org/cicirello/permutations/distance/ScrambleDistance.html" title="class in org.cicirello.permutations.distance">ScrambleDistance</a></li>
67-
<li><a href="org/cicirello/sequences/distance/SequenceDistanceMeasurer.html" title="interface in org.cicirello.sequences.distance"><span class="interfaceName">SequenceDistanceMeasurer</span></a></li>
68-
<li><a href="org/cicirello/sequences/distance/SequenceDistanceMeasurerDouble.html" title="interface in org.cicirello.sequences.distance"><span class="interfaceName">SequenceDistanceMeasurerDouble</span></a></li>
69-
<li><a href="org/cicirello/sequences/SequenceSampler.html" title="class in org.cicirello.sequences">SequenceSampler</a></li>
70-
<li><a href="org/cicirello/permutations/distance/SquaredDeviationDistance.html" title="class in org.cicirello.permutations.distance">SquaredDeviationDistance</a></li>
71-
<li><a href="org/cicirello/math/stats/Statistics.html" title="class in org.cicirello.math.stats">Statistics</a></li>
28+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/AcyclicEdgeDistance.html" title="class in org.cicirello.permutations.distance">AcyclicEdgeDistance</a></li>
29+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/BlockInterchangeDistance.html" title="class in org.cicirello.permutations.distance">BlockInterchangeDistance</a></li>
30+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/CyclicEdgeDistance.html" title="class in org.cicirello.permutations.distance">CyclicEdgeDistance</a></li>
31+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/CyclicIndependentDistance.html" title="class in org.cicirello.permutations.distance">CyclicIndependentDistance</a></li>
32+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/CyclicIndependentDistanceDouble.html" title="class in org.cicirello.permutations.distance">CyclicIndependentDistanceDouble</a></li>
33+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/CyclicReversalIndependentDistance.html" title="class in org.cicirello.permutations.distance">CyclicReversalIndependentDistance</a></li>
34+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/CyclicReversalIndependentDistanceDouble.html" title="class in org.cicirello.permutations.distance">CyclicReversalIndependentDistanceDouble</a></li>
35+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/CyclicRTypeDistance.html" title="class in org.cicirello.permutations.distance">CyclicRTypeDistance</a></li>
36+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/DeviationDistance.html" title="class in org.cicirello.permutations.distance">DeviationDistance</a></li>
37+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/DeviationDistanceNormalized.html" title="class in org.cicirello.permutations.distance">DeviationDistanceNormalized</a></li>
38+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/DeviationDistanceNormalized2005.html" title="class in org.cicirello.permutations.distance">DeviationDistanceNormalized2005</a></li>
39+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/EditDistance.html" title="class in org.cicirello.permutations.distance">EditDistance</a></li>
40+
<li><a href="org.cicirello.jpt/org/cicirello/sequences/distance/EditDistance.html" title="class in org.cicirello.sequences.distance">EditDistance</a></li>
41+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/ExactMatchDistance.html" title="class in org.cicirello.permutations.distance">ExactMatchDistance</a></li>
42+
<li><a href="org.cicirello.jpt/org/cicirello/sequences/distance/ExactMatchDistance.html" title="class in org.cicirello.sequences.distance">ExactMatchDistance</a></li>
43+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/InterchangeDistance.html" title="class in org.cicirello.permutations.distance">InterchangeDistance</a></li>
44+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/KendallTauDistance.html" title="class in org.cicirello.permutations.distance">KendallTauDistance</a></li>
45+
<li><a href="org.cicirello.jpt/org/cicirello/sequences/distance/KendallTauSequenceDistance.html" title="class in org.cicirello.sequences.distance">KendallTauSequenceDistance</a></li>
46+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/LeeDistance.html" title="class in org.cicirello.permutations.distance">LeeDistance</a></li>
47+
<li><a href="org.cicirello.jpt/org/cicirello/sequences/distance/LongestCommonSubsequenceDistance.html" title="class in org.cicirello.sequences.distance">LongestCommonSubsequenceDistance</a></li>
48+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/NormalizedPermutationDistanceMeasurer.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">NormalizedPermutationDistanceMeasurer</span></a></li>
49+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/NormalizedPermutationDistanceMeasurerDouble.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">NormalizedPermutationDistanceMeasurerDouble</span></a></li>
50+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/Permutation.html" title="class in org.cicirello.permutations">Permutation</a></li>
51+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/Permutation.Mechanic.html" title="class in org.cicirello.permutations">Permutation.Mechanic</a></li>
52+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/PermutationDistanceMeasurer.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">PermutationDistanceMeasurer</span></a></li>
53+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/PermutationDistanceMeasurerDouble.html" title="interface in org.cicirello.permutations.distance"><span class="interfaceName">PermutationDistanceMeasurerDouble</span></a></li>
54+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/PermutationIterator.html" title="class in org.cicirello.permutations">PermutationIterator</a></li>
55+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/ReinsertionDistance.html" title="class in org.cicirello.permutations.distance">ReinsertionDistance</a></li>
56+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/ReversalDistance.html" title="class in org.cicirello.permutations.distance">ReversalDistance</a></li>
57+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/ReversalIndependentDistance.html" title="class in org.cicirello.permutations.distance">ReversalIndependentDistance</a></li>
58+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/ReversalIndependentDistanceDouble.html" title="class in org.cicirello.permutations.distance">ReversalIndependentDistanceDouble</a></li>
59+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/RTypeDistance.html" title="class in org.cicirello.permutations.distance">RTypeDistance</a></li>
60+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/ScrambleDistance.html" title="class in org.cicirello.permutations.distance">ScrambleDistance</a></li>
61+
<li><a href="org.cicirello.jpt/org/cicirello/sequences/distance/SequenceDistanceMeasurer.html" title="interface in org.cicirello.sequences.distance"><span class="interfaceName">SequenceDistanceMeasurer</span></a></li>
62+
<li><a href="org.cicirello.jpt/org/cicirello/sequences/distance/SequenceDistanceMeasurerDouble.html" title="interface in org.cicirello.sequences.distance"><span class="interfaceName">SequenceDistanceMeasurerDouble</span></a></li>
63+
<li><a href="org.cicirello.jpt/org/cicirello/sequences/SequenceSampler.html" title="class in org.cicirello.sequences">SequenceSampler</a></li>
64+
<li><a href="org.cicirello.jpt/org/cicirello/permutations/distance/SquaredDeviationDistance.html" title="class in org.cicirello.permutations.distance">SquaredDeviationDistance</a></li>
7265
</ul>
7366
</main>
7467
</body>

docs/api/allpackages-index.html

Lines changed: 7 additions & 37 deletions
Original file line numberDiff line numberDiff line change
@@ -32,7 +32,7 @@
3232
}
3333
//-->
3434
var pathtoroot = "./";
35-
var useModuleDirectories = false;
35+
var useModuleDirectories = true;
3636
loadScripts(document, 'script');</script>
3737
<noscript>
3838
<div>JavaScript is disabled on your browser.</div>
@@ -49,7 +49,7 @@
4949
<!-- -->
5050
</a>
5151
<ul class="navList" title="Navigation">
52-
<li><a href="index.html">Overview</a></li>
52+
<li><a href="org.cicirello.jpt/module-summary.html">Module</a></li>
5353
<li>Package</li>
5454
<li>Class</li>
5555
<li>Use</li>
@@ -111,59 +111,29 @@ <h1 title="All&amp;nbsp;Packages" class="title">All&nbsp;Packages</h1>
111111
</tr>
112112
<tbody>
113113
<tr class="altColor">
114-
<th class="colFirst" scope="row"><a href="org/cicirello/math/package-summary.html">org.cicirello.math</a></th>
115-
<td class="colLast">
116-
<div class="block">Collection of classes related to a variety of mathematical concepts.</div>
117-
</td>
118-
</tr>
119-
<tr class="rowColor">
120-
<th class="colFirst" scope="row"><a href="org/cicirello/math/la/package-summary.html">org.cicirello.math.la</a></th>
121-
<td class="colLast">
122-
<div class="block">Collection of classes related to linear algebra.</div>
123-
</td>
124-
</tr>
125-
<tr class="altColor">
126-
<th class="colFirst" scope="row"><a href="org/cicirello/math/rand/package-summary.html">org.cicirello.math.rand</a></th>
127-
<td class="colLast">
128-
<div class="block">Collection of classes related to random number generation.</div>
129-
</td>
130-
</tr>
131-
<tr class="rowColor">
132-
<th class="colFirst" scope="row"><a href="org/cicirello/math/stats/package-summary.html">org.cicirello.math.stats</a></th>
133-
<td class="colLast">
134-
<div class="block">Collection of classes related to statistics.</div>
135-
</td>
136-
</tr>
137-
<tr class="altColor">
138-
<th class="colFirst" scope="row"><a href="org/cicirello/permutations/package-summary.html">org.cicirello.permutations</a></th>
114+
<th class="colFirst" scope="row"><a href="org.cicirello.jpt/org/cicirello/permutations/package-summary.html">org.cicirello.permutations</a></th>
139115
<td class="colLast">
140116
<div class="block">Collection of classes related to representing and manipulating permutations.</div>
141117
</td>
142118
</tr>
143119
<tr class="rowColor">
144-
<th class="colFirst" scope="row"><a href="org/cicirello/permutations/distance/package-summary.html">org.cicirello.permutations.distance</a></th>
120+
<th class="colFirst" scope="row"><a href="org.cicirello.jpt/org/cicirello/permutations/distance/package-summary.html">org.cicirello.permutations.distance</a></th>
145121
<td class="colLast">
146122
<div class="block">Implementations of a variety of permutation distance measures.</div>
147123
</td>
148124
</tr>
149125
<tr class="altColor">
150-
<th class="colFirst" scope="row"><a href="org/cicirello/sequences/package-summary.html">org.cicirello.sequences</a></th>
126+
<th class="colFirst" scope="row"><a href="org.cicirello.jpt/org/cicirello/sequences/package-summary.html">org.cicirello.sequences</a></th>
151127
<td class="colLast">
152128
<div class="block">Classes that perform a variety of operations on sequences (such as arrays, etc).</div>
153129
</td>
154130
</tr>
155131
<tr class="rowColor">
156-
<th class="colFirst" scope="row"><a href="org/cicirello/sequences/distance/package-summary.html">org.cicirello.sequences.distance</a></th>
132+
<th class="colFirst" scope="row"><a href="org.cicirello.jpt/org/cicirello/sequences/distance/package-summary.html">org.cicirello.sequences.distance</a></th>
157133
<td class="colLast">
158134
<div class="block">Implementations of distance measures for general sequences of various forms, including Strings, arrays of primitive types, arrays of objects, etc.</div>
159135
</td>
160136
</tr>
161-
<tr class="altColor">
162-
<th class="colFirst" scope="row"><a href="org/cicirello/util/package-summary.html">org.cicirello.util</a></th>
163-
<td class="colLast">
164-
<div class="block">This package includes classes and interfaces that serve some useful utility purpose.</div>
165-
</td>
166-
</tr>
167137
</tbody>
168138
</table>
169139
</li>
@@ -181,7 +151,7 @@ <h1 title="All&amp;nbsp;Packages" class="title">All&nbsp;Packages</h1>
181151
<!-- -->
182152
</a>
183153
<ul class="navList" title="Navigation">
184-
<li><a href="index.html">Overview</a></li>
154+
<li><a href="org.cicirello.jpt/module-summary.html">Module</a></li>
185155
<li>Package</li>
186156
<li>Class</li>
187157
<li>Use</li>

0 commit comments

Comments
 (0)