You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Copy file name to clipboardExpand all lines: _pages/plugins/trackmate/detectors/trackmate-omnipose.md
+11Lines changed: 11 additions & 0 deletions
Display the source diff
Display the rich diff
Original file line number
Diff line number
Diff line change
@@ -78,6 +78,17 @@ pip install scipy==1.11.4
78
78
pip install omnipose==1.0.6
79
79
```
80
80
81
+
On lunux (Ubuntu)
82
+
```sh
83
+
mamba create -n omnipose-106 'python==3.9.18'
84
+
mamba activate omnipose-106
85
+
pip3 install torch torchvision
86
+
pip install natsort
87
+
pip install scipy==1.11.4
88
+
pip install omnipose==1.0.6
89
+
omnipose
90
+
```
91
+
81
92
### Troubleshooting "Found 0 spots" errors with pretrained models
82
93
83
94
On some systems we have noticed that sometimes TrackMate returns 0 detections for the cellpose and omnipose detectors, even when the installation of these two programs worked correctly.
0 commit comments