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| 1 | +Release 2.27-rXXXX (XX March 2024) |
| 2 | +---------------------------------- |
| 3 | + |
| 4 | +Notable changes to minimap2: |
| 5 | + |
| 6 | + * New feature: added the `lr:hq` preset for accurate long reads at ~1% error |
| 7 | + rate. This was suggested by Oxford Nanopore developers (#1127). It is not |
| 8 | + clear if this preset also works well for PacBio HiFi reads. |
| 9 | + |
| 10 | + * New feature: added the `map-iclr` preset for Illumina Complete Long Reads |
| 11 | + (#1069), provided by Illumina developers. This change also added option `-b` |
| 12 | + to specify mismatch penalty for transition mutations. |
| 13 | + |
| 14 | + * New feature: added option `--ds` to generate a new `ds:Z` tag. `ds` |
| 15 | + indicates uncertainty in INDEL positions. It is an extension to `cs`. The |
| 16 | + `mgutils-es6.js` script in minigraph parses `ds`. |
| 17 | + |
| 18 | + * Bugfix: avoided a NULL pointer dereference (#1154). |
| 19 | + |
| 20 | + * Bugfix: reverted the value of `ms:i` to pre-2.22 versions (#1146). This was |
| 21 | + an oversight. See fcd4df2 for details. |
| 22 | + |
| 23 | +Notable changes to paftools.js and mappy: |
| 24 | + |
| 25 | + * New feature: expose `bw_long` to mappy's Aligner class (#1124). |
| 26 | + |
| 27 | + * Bugfix: fixed several compatibility issues with k8 v1.0 (#1161 and #1166). |
| 28 | + Subcommands "call", "pbsim2fq" and "mason2fq" were not working with v1.0. |
| 29 | + |
| 30 | +(2.27: XX March 2024, rXXXX) |
| 31 | + |
| 32 | + |
| 33 | + |
1 | 34 | Release 2.26-r1175 (29 April 2023) |
2 | 35 | ---------------------------------- |
3 | 36 |
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4 | 37 | Fixed the broken Python package. This is the only change. |
5 | 38 |
|
6 | | -(2.25: 25 April 2023, r1173) |
| 39 | +(2.26: 25 April 2023, r1173) |
7 | 40 |
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8 | 41 |
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9 | 42 |
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