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1. GoSTRIPES GoSTRIPES Public

   Computational workflows for STRIPE-seq data analyses

   Perl 4 5

2. TSRbuild TSRbuild Public

   Scripts and workflows for transcription start region (TSR) exploration

   Shell 5

3. AEGeAn AEGeAn Public

   Integrated toolkit for analysis and evaluation of annotated genomes

   C 25 10

4. TSRchitect TSRchitect Public

   Promoter identification from diverse types of large-scale TSS profiling data

   R 1 4

5. MoVRs MoVRs Public

   Motif set Reduction and Validation (MoVRs) - a workflow for the derivation of genome-wide DNA motif detection and vetting

   Perl 6 5

6. BWASP BWASP Public

   Bisulfite-seq data Workflow Automation Software and Protocols

   Shell 2 5