Deprecate `get_most_severe_consequence_for_summary` in favor of more flexible `get_most_severe_csq_from_multiple_csq_lists`#714

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jkgoodrich wants to merge 38 commits intomainfrom

jg/deprecate_get_most_severe_consequence_for_summary

Commits on Jun 13, 2024

Add prioritize_loftee_no_flags to get_most_severe_csq_from_multiple_csq_lists and make use of it in process_consequences
jkgoodrich
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Add tests for vep functions used in this PR
jkgoodrich
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Commits on Jun 14, 2024

Merge branch 'main' of https://github.com/broadinstitute/gnomad_methods into jg/fix_process_consequences
jkgoodrich
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Commits on Jun 25, 2024

Commits on Oct 18, 2024

Merge branch 'main' of https://github.com/broadinstitute/gnomad_methods into jg/deprecate_get_most_severe_consequence_for_summary
jkgoodrich
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Commits on Oct 24, 2024