v0.2.9

What's Changed

• Improved docs for annotator by @cmungall in #92
• Using inflect library to depluralize class names when generalizing. by @cmungall in #94
• update dependencies fixes #95 fixes #97 by @sierra-moxon in #96

Full Changelog: v0.2.8...v0.2.9

v0.2.8

What's Changed

• Additional tests and documentation by @cmungall in #86
• Added toml generalizer by @cmungall in #90

Full Changelog: v0.2.7...v0.2.8

v0.2.7

Highlights

Generation of LinkML schemas by generalizing from tables in web pages

For example, given this table:

https://www.nature.com/articles/s41467-022-31626-4/tables/1

Run:

schemauto  generalize-htmltable  https://www.nature.com/articles/s41467-022-31626-4/tables/1

To get

name: example
description: example
id: https://w3id.org/example
imports:
- linkml:types
prefixes:
  linkml: https://w3id.org/linkml/
  example: https://w3id.org/example
default_prefix: example
slots:
  GWAS trait:
    examples:
    - value: "\xC2"
    range: string
  Peak GWAS SNP:
    examples:
    - value: rs2974298
    range: string
  Gene:
    examples:
    - value: SMIM19
    range: string
  NK cell cis eSNP:
    examples:
    - value: rs2974348
    range: string
  TWAS Z score:
    examples:
    - value: '3.809'
    range: string
  TWAS P value:
    examples:
    - value: '0.0001'
    range: string
classes:
  example:
    slots:
    - GWAS trait
    - Peak GWAS SNP
    - Gene
    - NK cell cis eSNP
    - TWAS Z score
    - TWAS P value

What's Changed

• Enhancing sphinx docs by @cmungall in #80
• Re committing sql_importer. by @sierra-moxon @cmungall in #82
• Added generalization using panderas by @cmungall in #84

Full Changelog: v0.2.6...v0.2.7

v0.2.6

What's Changed

• First pass at SQL Importer. See #67 by @cmungall in #78
• Added frictionless importer by @cmungall in #79

Full Changelog: v0.2.5...v0.2.6

v0.2.5

What's Changed

• Schema enricher and Docker config by @cmungall in #77

Full Changelog: v0.2.4...v0.2.5

v0.2.4

What's Changed

• refactoring by @cmungall in #75

Full Changelog: v0.2.3...v0.2.4

v0.2.3

What's Changed

• fixing pypi release action by @cmungall in #73

Full Changelog: v0.2.2...v0.2.3

v0.2.2

What's Changed

• update pypi release action by @cmungall in #72

Full Changelog: v0.2.1...v0.2.2

v0.2.1

What's Changed

• removing unused files by @cmungall in #71

Full Changelog: v0.2.0...v0.2.1

v0.2.0

• reorganized packages; split importers into generalizers and importers
• created a new CLI single-command multi-subcommand package
  • tsv2linkml etc now deprecated
  • use schemauto generalize-tsv now
• added more docs

What's Changed

• Small fixes to automator by @matentzn in #69
• Refactored package layout and command line interface by @cmungall in #70

New Contributors

• @matentzn made their first contribution in #69

Full Changelog: v0.1.7...v0.2.0