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Merged
merged 3 commits into from
Sep 9, 2025
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Prepare release of v0.3.1 #60

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d068220
Update changelog and version identifier
apdavison Sep 9, 2025
bcf538e
Update author list in codemeta.json
apdavison Sep 9, 2025
6818a0d
Use rsync rather than cp to ensure that old files are removed
apdavison Sep 9, 2025
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13 changes: 13 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -53,3 +53,16 @@ For more detail see #29.

- Added release candidate for openMINDS v4
- Nodes in a collection are now sorted by ID.

## Release 0.3.1 (2025-09-09)

- includes fixes and additions to instance library, including:
- replacement of MRAcquisitionType by MRSpatialEncoding
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@Raphael-Gazzotti Raphael-Gazzotti Sep 9, 2025

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A small cleanup of openminds/latest/controlled_terms/mr_acquisition_type.py might also help improve consistency with the update.

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@apdavison apdavison Sep 9, 2025

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I've modified the build actions to use rsync rather than cp, as you did for the main repo. Hopefully this will solve the problem.

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@Raphael-Gazzotti Raphael-Gazzotti Sep 9, 2025

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Just a quick note: since rsync also consider the .git directory, it’s best to include the option "--exclude '.git/'". I missed this the first time, and Oliver spotted the issue.

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@apdavison apdavison Sep 9, 2025

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done. thanks!

- the addition of a Marmoset brain atlas, and some other new instances
- improved consistency of @id paths, spelling corrections, improved term definitions
- more reliable export as JSON-LD: specifically when a property which expects a single value
has a list/tuple as a value, this would break JSON-LD export.
Now, although it is marked as a validation failure, this does not prevent export.
- addition of a `Link` class, to allow making reference to remote graph nodes defined by their `@id`
that are not present locally.
- improved CI testing: we now test v3 and v4, as well as "latest".
3 changes: 2 additions & 1 deletion build.py
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Expand Up @@ -112,7 +112,7 @@

env = Environment(loader=FileSystemLoader(os.path.dirname(os.path.realpath(__file__))), autoescape=select_autoescape())
context = {
"version": "0.3.0",
"version": "0.3.1",
}
if args.branch == "development":
context["version"] += ".dev"
Expand All @@ -130,6 +130,7 @@
shutil.copy("pipeline/src/collection.py", "target/openminds/collection.py")
shutil.copy("pipeline/src/README.md", "target/README.md")
shutil.copy("./LICENSE", "target/LICENSE")
shutil.copy("./CHANGELOG.md", "target/CHANGELOG.md")

# If we have a PyPI release for the current version, complete the codemeta.json template
try:
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6 changes: 6 additions & 0 deletions pipeline/src/codemeta.json
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Expand Up @@ -46,6 +46,12 @@
"@type": "Person",
"givenName": "Louisa",
"familyName": "Köhnen"
},
{
"@type": "Person",
"@id": "https://orcid.org/0000-0002-5618-9776",
"givenName": "Raphaël",
"familyName": "Gazzotti"
}
]
}