TASK-7922 - Fix: update JWT secret key for new environments

[pfurio]

No description provided.

[halender]

Task linked: TASK-7922 Fix: update JWT secret key for new environments

[Copilot]

Pull Request Overview

This PR adds a new API endpoint to list current organizations across all client implementations (Java, Python, JavaScript, R) and the CLI tool. While the PR title references JWT secret key updates, the actual changes implement organization listing functionality.

Key Changes:

• Added /admin/organizations/list GET endpoint in the server
• Implemented corresponding client methods across all supported languages
• Added CLI command organizations-list for command-line access

Reviewed Changes

Copilot reviewed 9 out of 9 changed files in this pull request and generated 2 comments.

Show a summary per file

File	Description
AdminWSServer.java	Adds new GET endpoint /admin/organizations/list that returns organization IDs
admin_client.py	Implements Python client method list_organizations()
Admin.js	Implements JavaScript client method listOrganizations()
AdminClient.java	Implements Java client method listOrganizations()
Admin-methods.R	Implements R client method for organization listing
AdminCommandOptions.java	Adds CLI command options class for organizations-list command
AdminCommandExecutor.java	Implements CLI executor for organization listing
OpencgaCliOptionsParser.java	Registers the new organizations-list subcommand
OpenCgaCompleter.java	Adds autocomplete support for the new command

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