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production-pipelines
production-pipelines PublicGenomics workflows for CPG using Hail Batch
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ClinvArbitration
ClinvArbitration PublicA side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the CPG
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populationgenomics/alphagenome’s past year of commit activity - cpg-flow-align-genotype Public
populationgenomics/cpg-flow-align-genotype’s past year of commit activity - dragen_align_pa Public
populationgenomics/dragen_align_pa’s past year of commit activity - cpg-flow-lrs-annotation Public
For creating annotated callsets for seqr from long-read-sequencing data
populationgenomics/cpg-flow-lrs-annotation’s past year of commit activity - cpg-flow-gatk-sv Public
CPG-Flow implementation of the GATK-SV pipeline, deployed at the Centre for Population Genomics
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