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VinzentRisch
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closes #375

  • migrates actions collate_contigs, collate_genomes and partition_contigs from q2-types

@github-project-automation github-project-automation bot moved this to Backlog in 2025.10 👻 Sep 25, 2025
@ebolyen ebolyen moved this from Backlog to In Development in 2025.10 👻 Sep 25, 2025
@VinzentRisch VinzentRisch marked this pull request as ready for review September 29, 2025 15:52
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LGTM!

@github-project-automation github-project-automation bot moved this from In Development to Ready for Merge in 2025.10 👻 Oct 2, 2025
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Sorry @VinzentRisch, I noticed only now.

from qiime2.plugin.testing import TestPluginBase

from q2_types.per_sample_sequences import MultiMAGSequencesDirFmt
from build.lib.q2_types.per_sample_sequences import ContigSequencesDirFmt
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Ooops, I think the build.lib does not belong here - see the failing test.

@github-project-automation github-project-automation bot moved this from Ready for Merge to In Development in 2025.10 👻 Oct 2, 2025
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MAINT: migrate collate-contigs, collate-genomes and partition-contigs actions to q2-types from q2-assembly
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