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Enable <code>alignments</code> on sc2ts ARG internal nodes

Status: Open.

#3293 In tskit-dev/tskit;

· jeromekelleher opened on Oct 14, 2025

Review skipped tests

Status: Open.

#3192 In tskit-dev/tskit;

· benjeffery opened on Jun 6, 2025

add tests for failure when using nonsensical mutation parents

Status: Open.

#3310 In tskit-dev/tskit;

· petrelharp opened on Nov 3, 2025

<code>link_ancestors</code> probably should work on immutable tables, but does not?

Status: Open.

#3311 In tskit-dev/tskit;

· petrelharp opened on Nov 4, 2025

'mutation' mode for statistics

Status: Open.

#3299 In tskit-dev/tskit;

· petrelharp opened on Oct 16, 2025

Document mutation mode and change site mode description

documentationDocumentationDocumentation

Status: Open.

#3302 In tskit-dev/tskit;

· gregorgorjanc opened on Oct 22, 2025

Add link-ancestors to TreeSequence and ImmutableTableCollection

Status: Draft (not ready).

tskit-dev/tskitnumber 3312

#3312 In tskit-dev/tskit;

· benjeffery opened on Nov 4, 2025

Alignments C API

Status: Open.

#3319 In tskit-dev/tskit;

· benjeffery opened on Nov 11, 2025

Allow duplicate nodes in tsk_variant_init

Status: Open.

#3323 In tskit-dev/tskit;

· benjeffery opened on Nov 12, 2025