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@vitessce

Vitessce

Visual integration tool for exploration of spatial single cell experiments. A project of the HIDIVE Lab at @hms-dbmi.

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  1. vitessce vitessce Public

    Vitessce is a visual integration tool for exploration of spatial single-cell experiments.

    JavaScript 222 53

  2. vitessce-python vitessce-python Public

    Python API and Jupyter widget for Vitessce

    Python 57 10

  3. vitessceR vitessceR Public

    R API and htmlwidget for Vitessce

    R 43 7

  4. easy_vitessce easy_vitessce Public

    Configure Vitessce using existing Scverse plotting APIs

    Python 8 2

Repositories

Showing 10 of 11 repositories
  • vitessce-python Public

    Python API and Jupyter widget for Vitessce

    vitessce/vitessce-python’s past year of commit activity
    Python 57 MIT 10 105 9 Updated Oct 30, 2025
  • easy_vitessce Public

    Configure Vitessce using existing Scverse plotting APIs

    vitessce/easy_vitessce’s past year of commit activity
    Python 8 MIT 2 6 0 Updated Oct 30, 2025
  • vitessce Public

    Vitessce is a visual integration tool for exploration of spatial single-cell experiments.

    vitessce/vitessce’s past year of commit activity
    JavaScript 222 MIT 53 405 34 Updated Oct 27, 2025
  • vitessce-link Public
    vitessce/vitessce-link’s past year of commit activity
    TypeScript 0 0 1 0 Updated Sep 18, 2025
  • vitessceR Public

    R API and htmlwidget for Vitessce

    vitessce/vitessceR’s past year of commit activity
    R 43 7 17 5 Updated Aug 13, 2025
  • vitessce-demo-gh-pages Public

    Demo of deploying a Vitessce instance to GitHub Pages

    vitessce/vitessce-demo-gh-pages’s past year of commit activity
    JavaScript 0 2 0 0 Updated May 8, 2025
  • vitessceAnalysisR Public

    Data conversion helpers for data analysis with vitessceR

    vitessce/vitessceAnalysisR’s past year of commit activity
    R 4 0 9 (6 issues need help) 1 Updated Jun 20, 2024
  • paper-figures Public
    vitessce/paper-figures’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 24, 2024
  • negspy Public Forked from pkerpedjiev/negspy

    Python NGS Repository

    vitessce/negspy’s past year of commit activity
    Python 0 MIT 14 0 0 Updated Feb 8, 2024
  • vitessce-python-tutorial Public

    Notebooks for HuBMAP tutorial session (January 2023)

    vitessce/vitessce-python-tutorial’s past year of commit activity
    Jupyter Notebook 9 1 4 1 Updated Jun 29, 2023
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